Garman Group
Publications
All recent publications are linked to the publisher using DOI (digital object identifier) links for persistant identification and semantic interoperability. Some of the older publications are available as PDF if you are within University of Oxford, for copyright reasons.
2009
Elspeth F. Garman and Colin Nave
Radiation Damage in Protein Crystals Examined Under Various Conditions by
Different Methods
J. Synchrotron Rad. (2009) 16, 129-132
Robin L. Owen, James M. Holton, Clemens Schulze-Briese, and Elspeth F. Garman
Determination of X-ray flux using silicon pin diodes
J. Synchrotron Rad. (2009) 16, 143-151
Karthik S. Paithankar, Robin Leslie Owen , Elspeth F. Garman
Absorbed dose calculations for macromolecular crystals: improvements to RADDOSE
J. Synchrotron Rad. (2009) 16, 152-162
John McGeehan, Raimond B.G. Ravelli, James W. Murray, Robin Leslie Owen, Florent Cipriani, Sean McSweeney, Martin Weik, Elspeth F. Garman
Colouring Cryo-Cooled Crystals: on-line microspectrophotometry
J. Synchrotron Rad. (2009) 16, 163-172
Adam I. Barker, Robert J. Southworth-Davies, Karthik S.
Paithankar, Ian Carmichael and Elspeth F. Garman
Room temperature scavengers for MX: increased lifetimes and modified dose dependence
of the intensity decay
J. Synchrotron Rad. (2009) 16, 205-216
Véronique Sauvé, Pietro Roversi, Kirstin J.
Leath, Elspeth F. Garman, Robin Antrobus, Susan M. Lea, and Ben C. Berks
Mechanism for the Hydrolysis of a Sulfur-Sulfur Bond Based on the Crystal
Structure of the Thiosulfohydrolase SoxB
J. Biol. Chem. (2009)
284, 21707-21718
Elspeth Garman
Crystal handling for cryogenic data collection
Crystallisation of Proteins: Techniques, strategies and Tips. A Laboratory
Manual.
Editor Terese Bergfors. Publisher: International University
Line, La Jolla, U.S.A. 1999
ISBN 0-9636817-5-3.
2008
Simon C Willies, Michael N, Isupov, Elspeth F. Garman, Jennifer A. Littlechild
The binding of haem and zinc in the 1.9 Å X-ray structure of
Escherichia coli bacterioferritin
Journal Biological Inorganic Chemistry
(2009) e-pub 2008, 14(2), 201-207
Daniel J. Koslover, Anastasia J. Callaghan, MariaJose Marcaida, Elspeth F. Garman, Monika Martick, William G .Scott and Ben Luisi
The crystal structure of the Escherichia coli RNase apoprotein and a
mechanism for RNA degradation.
Structure (2008) 16, 1238-1244
Richard J. Bingham, Enrique Rudiño-Piñera, Nicola A.G. Meenan, Ulrich Schwarz-Linek, Johan P. Turkenburg, Magnus Höök, Elspeth F. Garman and Jennifer R. Potts
Crystal structures of fibronectin-binding sites from Staphylococcus
aureus FnBPA in complex with fibronectin domains.
Proc. Nat. Acad. Sci(2008) 105, 12254-12258
Elspeth Garman
Macromolecular cryo-crystallography
Evolving Methods
for Macromolecular Crystallography: The Structural Path to the Understanding of
the Mechanism of Action of CBRN Agents (NATO Science Series II: Mathematics,
Physics and Chemistry)
Editors: Randy J. Read, Joel L. Sussman.
Publisher: Springer, March 1, 2008
ISBN 1402063156.
2007
Robert J. Southworth-Davies, Melissa A. Medina, Ian Carmichael and Elspeth F.
Garman
Observation of Decreased Radiation Damage at Higher Dose
Rates in Room Temperature Protein Crystallography
Structure (2007) 15, 1531-1541
Enrique Rudiño-Piñera, Raimond B.G. Ravelli, George M. Sheldrick,
Max H. Nanao, Vladimir V. Korostelev, Joern M. Werner, Ulrich Schwarz-Linek,
Jennifer R. Potts and Elspeth F. Garman
The solution and crystal
structures of a module pair from the Staphylococcus aureus -binding site of
human fibronectin - a tale with a twist
JMB (2007) 368, 833-844
Will A Stanley, Niko Pursiainen, Elspeth F Garman, Andre Juffer, Matthias
Wilmanns and Petri Kursula
A previously unobserved conformation for
the human Pex5p receptor suggests roles for intrinsic flexibility and rigid
domain motions in ligand binding
BMC Structural Biology (2007) 7, 24-36
Elspeth F. Garman and Sean McSweeney
Progress in research into
radiation damage in cryo-cooled macromolecular crystals
J. Synchrotron Rad. (2007) 14, 1-3
Robert J. Southworth-Davies and Elspeth F. Garman
Radioprotectant
screening for cryocrystallography.
J. Synchrotron Rad. (2007) 14, 73-83
Elspeth Garman and Robert Sweet
X-ray data collection from macromolecular
crystals
Methods in Molecular Biology. Editor Sylvie Doublié. The
Humana Press, NJ, USA. pages 63-94 (2007)
Elspeth Garman and Robin Owen
Cryocrystallography: practice and
optimisation.
Methods in Molecular Biology. Editor Sylvie Doublié.
The Humana Press, NJ, USA. pages 1-18 (2007)
Debora Lucarelli, Santina Russo, Elspeth Garman, Wolfram Meyer-Klaucke and
Ehmke Pohl
Crystal Structure and Function of the Zinc Uptake Regulator FurB from
Mycobacterium tuberculosis
JBC (2007) 282, 9914-9922
2006
Tobias Karlberg, Ulrika Schagerlöf, Oleksandr Gakh, Sungjo Park, Ulf Ryde,
Martin Lindahl, Kirstin Leath, Elspeth Garman, Grazia Isaya and Salam
Al-Karadaghi
The Structure of Frataxin Oligomers Reveal the Mechanism
for the Delivery and Detoxification of Iron.
Structure (2006) 14, 1535-1546
Tailor made drugs, if used wisely, will save lives
Elspeth Garman
Commentary, London
Evening Standard 24/2/06
Raimond B.G. Ravelli and Elspeth F. Garman
Radiation Damage in
Macromolecular CryoCrystallography
Current Opinion of Structural Biology (2006) 16, 624-629
Cyril Boyault, Benoit Gilquuin, Yu Zhang, Vladimir Rybin, Elspeth Garman,
Wolfram Meyer-Klaucke, Patrick Matthias, Christoph Mueller, and Saadi Khochbin.
HDAC6-p97/VCP controlled polyubiquitin chain turover.
EMBO Journal (2006), 1-10.
James C Analytis, Arzhang Ardevan, Stephen J.Blundell, Robin Leslie Owen,
Elspeth F .Garman, Chris Jeynes and Ben J.Powell.
The effect of
irradiation-induced disorder on the conductivity and critical temperature of
the organic superconductor .-(BEDT-TTF)2 Cu(SCN)2.
Phys Rev Letts. (2006) 96,177002.
Robin Leslie Owen, Enrique Rudiño-Piñera, Elspeth F.
Garman.
Experimental determination of the radiation dose limit for
cryocooled protein crystals.
PNAS (2006) 103, 4912-4917.
Elspeth Garman and Robin Leslie Owen.
Cryo-cooling and radiation
damage in macromolecular crystallography.
Acta Cryst D (2006) 62, 32-47.
2005
Elspeth F. Garman.
SARS proteomics reveals viral secrets.
Structure (2005) 11, 1582-1583.
A. Callaghan, Y. Redko, L. M. Murphy, G. Grossmann, D. Yates, E. Garman, L. L.
Ileg, C. V. Robinson, M. F. Symmons, K. J. McDowall and B. Luisi.
"Zn-link": A metal-sharing interface that organizes the quaternary
structure and catalytic site of the endoribonuclease, RNase E.
Biochemistry. (2005) 44, 4667-4675.
Colin Nave and Elspeth Garman.
Towards an understanding of radiation
damage in Cryo-cooled crystals.
JSR (2005), 12, 257-260.
James Murray, Enrique Rudiño-Piñera, Robin Owen, Martin
Gringinge, Raimond Ravelli and Elspeth Garman.
Parameters affecting
the X-ray dose absorbed by macromolecular crystals.
JSR (2005), 12, 268-275.
Robin Leslie Owen and Elspeth Garman.
A new method for predetermining the diffraction quality of protein crystals:
using SOAP as a selection tool
Acta Cryst. D (2005) 61, 130-140.
Elspeth Garman and Geoff Grime.
Elemental analysis of proteins by
microPIXE.
Progress in Biophysics and Molecular Biology. (2005) 89/2, 173-205.
The Structure, function and inhibition of influenza virus neuraminidase.
Elspeth Garman and Graeme Laver.
Chapter in `Viral Membrane Proteins:
Structure, Function and Drug Design.' Edited by Wolfgang Fischer. Kluwer
Academic/Plenum Publishers. 2005 Pages 247-267
2004
Robin Leslie Owen, Mice Pritchard and Elspeth Garman.
Temperature Characteristics of crystal storage devices in a CP100 dry shipping
Dewar.
J. Appl. Cryst. (2004) 37, 1000-1003.
Enrique Rudiño-Piñera, Uli Schwarz-Linek, Jen Potts and Elspeth Garman
Twinned or not twinned, that is the question: crystallisation and preliminary
crystallgraphic analysis of the 2F1(3)F1 module pair of human fibronectin.
Acta D (2004) 60, 1341-1345.
James Murray, Elspeth Garman and Raimond Ravelli.
X-ray absorption by macromolecular crystals: the effects of wavelength and
crystal composition on absorbed dose.
J. Appl. Cryst. (2004) 37, 513-522.
Paul H. Backe, Raimond B.G. Ravelli, Elspeth Garman and Stephen Cusack.
Crystallisation, microPIXE and preliminary crystallographic ananlysis of the
complex between the third KH domain of hnRNP K and single stranded DNA.
Acta D (2004) 60, 784-787
Elspeth Garman and Graeme Laver.
Controlling Influenza by Inhibiting the Virus's Neuraminidase.
Current Drug Targets (2004) 5
Florence Vincent, David Yates, Elspeth Garman, Gideon Davies and James Brannigan
The three-dimensional structure of the N-Acetylglucosamine-6-phosphate
Decetylase, NagA, from Bacillus subtilis
Journal of Biological Chemistry 279, 4, 2809-2816
D. Yates, E.F. Garman, N. Gemmell, I. Gomez-Morilla, G.W. Grime.
Characterisation Of Thin Support Films For MicroPIXE Analysis Of Metals In
Biological Materials
In 'Proceedings of
the 10th International Conference on Particle Induced X-ray Emission and its
Analytical Applications' ISBN 9616303627
Ed. Milos Budnar, Published
by Institute Josef Stefan, Ljubljana, Slovenia. 2004.
pdf
G.W. Grime, I. Gomez-Morilla, D. Yates, E.F. Garman.
PIXE analysis of
single atoms: measuring metal atom concentrations in protein molecules
In
`Proceedings of
the 10th International Conference on Particle Induced X-ray Emission and its
Analytical Applications' ISBN 9616303627
Ed. Milos Budnar, Published
by Institute Josef Stefan, Ljubljana, Slovenia. 2004.
pdf
2003
Elspeth Garman.
`Cool crystals': Cryocrystallography and Radiation Damage.
Current Opinion of Structural Biology 9, 545-551.
Elspeth Garman and James Murray.
Heavy-atom derivatisation.
Acta Cryst. D 59, 1903-1913.
Ehmke Pohl, Jon C. Haller, Ana Mijovilovich, Wolfram Meyer-Klaucke, Elspeth Garman and Michael Vasil.
Architecture of a protein central to iron homeostatis: crystal structure and
spectroscopic analysis of the ferric uptake regulator.
Molecular Microbiology 47 903-915.
Garman, E.F. and Doublie, S.
Cryocooling of Macromolecular Crystals: Optimisation Methods.
Methods in Enzymology (2003) 368, 188-216.
Eva Scheuring Vanamee, Pei-chung Hseih, Zhenyu Zhu, David Yates, Elspeth Garman, Shuang-yong Xu and Aneel Aggarwal.
Glucocorticoid-like Zn(Cys)4 Zn motifs in BslI restriction endonuclease.
J. Mol. Biol. 334, 595-603.
2002
Murray, J.M. and Garman, E.F.
Investigation of Possible Free Radical Scavengers and Metrics for Radiation
Damage in Protein Crystallography.
Journal of Synchrotron Radiation 9, 347-354.
O Neill, P., Stevens, D.L. and Garman, E.F.
Physical and chemical considerations of damage induced in protein crystals by
synchrotron radiation: a radiation chemical perspective.
Journal of Synchrotron Radiation 9, 329-332.
Elspeth Garman and Colin Nave.
Radiation damage to crystalline biological molecules: current view.
Journal of Synchrotron Radiation 9, 327-328.
Laver, W.G. and Garman, E.F.
Pandemic influenza: its origin and control.
Microbes and Infection 4,
1309-1316.
Timothy M.McPhillips, Scott E.McPhillips, Hsiu Ju Chiu, Aina E.Cohen,
Ashley M.Deacon, Paul J.Ellis, Elspeth Garman, Ana Gonzalez, Nicholas
K.Sauter, R.Paul Phizackerley, S. Michael Soltis and Peter Kuhn.
Blu-Ice and the Distribution Control System: software for data acquisition and
instrument control at macromolecular crystallography beamlines.
Journal of Synchrotron Radiation (2002) bf 9, 401-406.
2001
James Nicholson, Colin Nave, Khalid Fayz, Barry Fell and Elspeth Garman.
Modelling heating effects in cryocooled protein crystals
Nuc.Instr, Meth in physics research A 467-468 1380-1383
pdf
W.G.Laver and Elspeth Garman.
The Origin and Control of Pandemic Influenza.
Science 293, 1776-1777.
pdf
Andrea Szilagyi, Minakshi Ghosh, Elspeth Garman, Maria Vas
MgADP and 3-Phospholglycerate in open confirmation: New insight into the role
of the nucleotide in domain closure.
J. Mol. Biol 306, 499-511
pdf
Elspeth Garman.
Macromolecular Cryo-crystallography.
in Methods in
Macromolecular Crystallography, D.Turk and L.Johnson (Eds) Nato Science Series.
IOS Press 2001. Pages 15-25.
2000
Norica Branza-Nichita, Gabriela Negroiu, Andrei Petrescu, Elspeth Garman, Fran Platt, Mark Wormald, Raymond Dwek, Stefana Petrescu
Mutations at critical N-Glycosolation sites reduce tyrosinase activity by
altering folding and quality control
JBC, 275, 8169-9175
pdf
Mathew Bennett, Alexander Krah, Frank Wien, Elspeth Garman, Robert McKenna, Mark Sanderson, Stephen Neidle
A DNA-porphyrin minor groove complex at atomic resolution: The structural
consequences of porphyrin ruffling
PNAS, 97, 9476-9481
pdf
Arris, C.E., Boyle, F.T., Calvert, A.H., Curtin, N.J., Endicott, J.A., Garman E.F., Gibson, A.E., Golding, B.T., Grant, S., Griffin, R.J., Jesbury, P.,
Johnson, L.N., Lawrie, A.M., N
ewell, D.R., Noble, M.E., Sausville, E.A., Schultz, R., Yu,W.
Identification of novel purine and pyrimidine cyclin-dependant kinase
inhibitors with distinct molecular interactions and tumor cell growth inhibitor
profiles.
J.Med.Chem 43(15); 2797-2804.
pdf
Peter Kuhn, Elspeth Garman, S Michael Soltis.
Limitations in
Macromolecular Crystallography due to Radiation Damage.
Synchrotron
Radiation Instrumentation. Proceedings of the 11th US National Conference,
SLAC, 1999 Editors: P.\ Pianetta, John Arthur, Sean Brennan. ISBN
1-56396-941-6. (2000) 215-218
1999
Elspeth Garman.
Cool Data: Quantity and Quality.
Acta Cryst D. D55, 1641-1653.
pdf
Elspeth Garman.
Leaving no element of doubt: analysis of proteins using microPIXE.
Structure 7, R291-299.
pdf
Ed Mitchell, Peter Kuhn and Elspeth Garman.
Demystifying the Synchrotron Trip: a first time user's guide.
Structure, 7, R111-121.
pdf
Geoffrey W. Grime, Eva Palsgard, Elspeth F Garman, Marta Ugarte,
David Pottage and Paul Wyeth.
Recent Biomedical applications of the
Oxford Scanning Proton Microprobe.
International Journal of PIXE (1999) 9 199-216.
Elspeth Garman.
Crystal handling for cryogenic data collection
Chapter 17. In second edition `Crystallisation of Proteins: Techniques
strategies and Tips. A Laboratory Manual. Editor: Terese Bergfors. Publisher:
International University Line, La Jolla, U.S.A. 1999. ISBN 0-9636817-5-3
Elspeth Garman.
Crystallisation for Cryocrystallography.
Chapter
17. In `Crystallisation of Proteins: Techniques strategies and Tips. A
Laboratory Manual. Publisher: International University Line, La Jolla, U.S.A.
1999. ISBN 0-9636817-5-3
1997
Elspeth Garman and Thomas Schneider. (1997)
Macromolecular
Cryocrystallography.
J.Appl.Cryst. 30, 211-237.
1996
Elspeth Garman and Edward Mitchell. (1996)
Glycerol concentrations
required for cryoprotection of 50 typical protein crystallisation solutions.
J.Appl. Cryst. 29, 584-587.
1994
Edward Mitchell and Elspeth Garman. (1994)
Flash Freezing of Protein
crystals: Investigation of Mosaic Spread and Diffraction Limit with Variation
of Cryoprotectant Concentration.
J.Appl. Cryst. 27, 1070-1074.
(Publications in the field of Nuclear Structure Physics can be found here).
